EPPO-Q-bank

A database to support plant pest diagnostic activities

Sequence contents of the Q-bank Fungi database


The Q-bank Fungi database contains various loci for different organism groups.


Q-bank organism groupLocusAbbreviation
CeratocystisInternal transcribed spacers of the nrDNA operonITS
Translation elongation factor 1-alphaTEF
ColletotrichumInternal transcribed spacers of the nrDNA operonITS
ActinACT
Beta-tubulinTUB2
CalmodulinCAL
Chitin synthaseCHS-1
DNA lyase Apn1 and mating type protein Mat1-like geneAPN1/MAT1
Glutamine synthaseGS
Glyceraldehyde-3-phosphate dehydrogenaseGAPDH
Histone H3HIS-3
Manganese-superoxide dismutaseSOD2
Mating type protein MAT1-2MAT1-2
Putative DNA lyaseAPN2
RNA polymerase II second largest subunitRPB2
18S nrDNA small subunitSSU
28S nrDNA large subunitLSU
MelampsoraInternal transcribed spacers of the nrDNA operonITS
Cytochrome oxidase ICOI
28S nrDNA large subunitLSU
MoniliniaInternal transcribed spacers of the nrDNA operonITS
Translation elongation factor 1-alphaTEF
Mycosphaerella and anamorphsInternal transcribed spacers of the nrDNA operonITS
ActinACT
Beta-tubulinTUB2
CalmodulinCAL
RNA polymerase II second largest subunitRPB2
Translation elongation factor 1-alphaTEF
28S nrDNA large subunitLSU
Phoma(-like) generaInternal transcribed spacers of the nrDNA operonITS
ActinACT
Beta-tubulinTUB2
CalmodulinCAL
Chitin synthaseCHS-1
RNA polymerase II largest subunitRPB1
Translation elongation factor 1-alphaTEF
18S nrDNA small subunitSSU
28S nrDNA large subunitLSU
Phyllosticta/GuignardiaInternal transcribed spacers of the nrDNA operonITS
ActinACT
Glyceraldehyde-3-phosphate dehydrogenaseGAPDH
Translation elongation factor 1-alphaTEF
28S nrDNA large subunitLSU
PhytophthoraInternal transcribed spacers of the nrDNA operonITS
Beta-tubulinTUB2
Cytochrome oxidase ICOI
Cytochrome oxidase IICOII
Intergenic spacer of the nrDNA operonIGS
Ras-related protein-coding geneYPT1
Translation elongation factor 1-alphaTEF
PucciniaInternal transcribed spacers of the nrDNA operonITS
Intergenic spacer of the nrDNA operonIGS
28S nrDNA large subunitLSU
StenocarpellaInternal transcribed spacers of the nrDNA operonITS
Translation elongation factor 1-alphaTEF
28S nrDNA large subunitLSU
ThecaphoraInternal transcribed spacers of the nrDNA operonITS
28S nrDNA large subunitLSU
VerticilliumInternal transcribed spacers of the nrDNA operonITS
ActinACT
CalmodulinCAL
Cytochrome oxidase ICOI
Intergenic spacer of the nrDNA operonIGS
28S nrDNA large subunitLSU